# Installation script for Synapse Client for Python

############################################################

import sys

import os

import platform

import setuptools

import json

# check Python version, before we do anything

if sys.version_info.major < 3 and sys.version_info.minor < 6:

sys.stderr.write("The Synapse Client for Python requires Python 3.6+\n")

sys.stderr.write("Your Python appears to be version %d.%d.%d\n" % sys.version_info[:3])

sys.exit(-1)

# figure out the version

__version__ = json.loads(open('synapseclient/synapsePythonClient').read())['latestVersion']

description = """A client for Synapse, a collaborative compute space

that allows scientists to share and analyze data together.""".replace("\n", " ")

with open("README.md", "r") as fh:

long_description = fh.read()

# make sure not to overwrite existing .synapseConfig with our example one

data_files =\

[(os.path.expanduser('~'), ['synapseclient/.synapseConfig'])]\

if not os.path.exists(os.path.expanduser('~/.synapseConfig'))\

else []

test_deps = [

"pytest>=5.0.0,<7.0",

"pytest-mock>=3.0,<4.0",

"flake8>=3.7.0,<4.0",

"pytest-xdist[psutil]>=2.2,<3.0.0",

]

install_requires = [

'requests>=2.22.0,<3.0',

'keyring==12.0.2',

'deprecated>=1.2.4,<2.0',

]

# on Linux specify a cryptography dependency that will not

# require a Rust compiler to compile from source (< 3.4).

# on Linux cryptography is a transitive dependency

# (keyring -> SecretStorage -> cryptography)

# SecretStorage doesn't pin a version so otherwise if cryptography

# is not already installed the dependency will resolve to the latest

# and will require Rust if a precompiled wheel cannot be used

# (e.g. old version of pip or no wheel available for an architecture).

# if a newer version of cryptography is already installed that is

# fine we don't want to trigger a downgrade, hence the conditional

# addition of the versioned dependency.

if platform.system() == 'Linux':

try:

import cryptography # noqa

# already installed, don't need to install (or downgrade)

except ImportError:

install_requires.append('cryptography<3.4')

setuptools.setup(

# basic

name='synapseclient',

version=__version__,

packages=setuptools.find_packages(exclude=["tests", "tests.*"]),

# requirements

python_requires='>=3.6.*',

install_requires=install_requires,

extras_require={

'pandas': ["pandas>=0.25.0,<2.0"],

'pysftp': ["pysftp>=0.2.8,<0.3"],

'boto3': ["boto3>=1.7.0,<2.0"],

'docs': ["sphinx>=3.0,<4.0", "sphinx-argparse>=0.2,<0.3"],

'tests': test_deps,

':sys_platform=="linux"': ['keyrings.alt==3.1'],

},

# command line

entry_points={

'console_scripts': ['synapse = synapseclient.__main__:main']

},

# data

package_data={'synapseclient': ['synapsePythonClient', '.synapseConfig']},

data_files=data_files,

zip_safe=False,

# test

tests_require=test_deps,

# metadata to display on PyPI

description=description,

long_description=long_description,

long_description_content_type="text/markdown",

url='https://www.synapse.org',

author='The Synapse Engineering Team',

author_email='platform@sagebase.org',

license='Apache',

project_urls={

"Documentation": "https://python-docs.synapse.org",

"Source Code": "https://github.com/Sage-Bionetworks/synapsePythonClient",

"Bug Tracker": "https://github.com/Sage-Bionetworks/synapsePythonClient/issues",

},

classifiers=[

'Development Status :: 5 - Production/Stable',

'Programming Language :: Python',

'Programming Language :: Python :: 3.6',

'Programming Language :: Python :: 3.7',

'Programming Language :: Python :: 3.8',

'Programming Language :: Python :: 3.9',

'Operating System :: MacOS',

'Operating System :: Microsoft :: Windows',

'Operating System :: Unix',

'Operating System :: POSIX :: Linux',

'Intended Audience :: Developers',

'Intended Audience :: Science/Research',

'License :: OSI Approved :: Apache Software License',

'Topic :: Software Development :: Libraries',

'Topic :: Scientific/Engineering',

'Topic :: Scientific/Engineering :: Bio-Informatics'],

)