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Copy pathreprocess_cats.py
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54 lines (45 loc) · 1.69 KB
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# Copyright 2017 Erik Tollerud
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from __future__ import print_function
import os
import re
import sys
import numpy as np
print ('Execturing catwrite.R script... R must be installed...')
retcode = os.system("R --no-save < catwrite.R")
if retcode != 0:
print('catwrite.R failed to execute. Perhaps you need to install R?')
sys.exit(retcode)
cats = {}
for fn in os.listdir():
match = re.match(r'cat(\d?\d)', fn)
if match:
print("Processing file", fn)
grpi = int(match.group(1))
with open(fn) as f:
rows = [r.strip().split('"')[-1] for r in list(f)[1:]]
arr = np.array([[float(e) for e in row.split()] for row in rows])
assert arr.dtype != 'O'
cats[grpi] = arr
print('Removing', fn)
os.remove(fn)
# most of the cats should be the same shape, and begin at 216 (except for Nyan cat)
catstack = []
for num, cat in cats.items():
if cat.shape == (72, 288):
catstack.append(cat[:, 216:])
assert len(catstack) == len(cats)-1
catstack = np.array(catstack)
print('Saving cat stack as cats.npy')
np.save('cats', catstack)