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from libcpp cimport bool
cdef extern from "<stdint.h>":
ctypedef signed char int8_t
ctypedef signed short int16_t
ctypedef signed int int32_t
ctypedef signed long int64_t
ctypedef unsigned char uint8_t
ctypedef unsigned short uint16_t
ctypedef unsigned int uint32_t
ctypedef unsigned long long uint64_t
cdef extern from "libiarray/iarray.h":
ctypedef uint64_t ina_rc_t
cdef enum:
IARRAY_DIMENSION_MAX = 8
ctypedef enum iarray_container_flags_t:
IARRAY_CONTAINER_PERSIST = 0x1
ctypedef enum iarray_data_type_t:
IARRAY_DATA_TYPE_DOUBLE,
IARRAY_DATA_TYPE_FLOAT,
IARRAY_DATA_TYPE_MAX
ctypedef enum iarray_compression_codec_t:
IARRAY_COMPRESSION_BLOSCLZ = 0,
IARRAY_COMPRESSION_LZ4,
IARRAY_COMPRESSION_LZ4HC,
IARRAY_COMPRESSION_SNAPPY,
IARRAY_COMPRESSION_ZLIB,
IARRAY_COMPRESSION_ZSTD,
IARRAY_COMPRESSION_LIZARD
ctypedef enum iarray_eval_flags_t:
IARRAY_EXPR_EVAL_ITERBLOCK
IARRAY_EXPR_EVAL_ITERBLOSC
IARRAY_EXPR_EVAL_ITERCHUNK
ctypedef struct iarray_config_t:
iarray_compression_codec_t compression_codec
int compression_level
int use_dict
int filter_flags
int eval_flags
int max_num_threads
int8_t fp_mantissa_bits
int blocksize
ctypedef struct iarray_store_properties_t:
const char *id
ctypedef struct iarray_dtshape_t:
iarray_data_type_t dtype
int8_t ndim
int64_t shape[IARRAY_DIMENSION_MAX]
int64_t pshape[IARRAY_DIMENSION_MAX]
ctypedef struct iarray_context_t
ctypedef struct iarray_container_t
ctypedef struct iarray_expression_t
ina_rc_t iarray_init()
void iarray_destroy()
ina_rc_t iarray_context_new(iarray_config_t *cfg,
iarray_context_t **ctx)
void iarray_context_free(iarray_context_t **ctx)
ina_rc_t iarray_container_new(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
void iarray_container_free(iarray_context_t *ctx,
iarray_container_t **container)
ina_rc_t iarray_get_sframe(iarray_container_t *container,
char **sframe,
int64_t *len,
int *shared)
ina_rc_t iarray_container_info(iarray_container_t *c, int64_t *nbytes, int64_t *cbytes)
ina_rc_t iarray_arange(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
double start,
double stop,
double step,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_linspace(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
int64_t nelem,
double start,
double stop,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_zeros(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_ones(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_fill_float(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
float value,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_fill_double(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
double value,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_get_slice(iarray_context_t *ctx,
iarray_container_t *c,
int64_t *start,
int64_t *stop,
int64_t *pshape,
iarray_store_properties_t *store,
int flags,
bool view,
iarray_container_t **container)
ina_rc_t iarray_to_buffer(iarray_context_t *ctx,
iarray_container_t *container,
void *buffer,
size_t buffer_len)
ina_rc_t iarray_get_dtshape(iarray_context_t *ctx,
iarray_container_t *c,
iarray_dtshape_t *dtshape)
ina_rc_t iarray_from_buffer(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
void *buffer,
size_t buffer_len,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_from_file(iarray_context_t *ctx,
iarray_store_properties_t *store,
iarray_container_t **container,
bool load_in_mem)
bool iarray_is_empty(iarray_container_t *container)
ina_rc_t iarray_expr_new(iarray_context_t *ctx, iarray_expression_t **e)
void iarray_expr_free(iarray_context_t *ctx, iarray_expression_t **e)
ina_rc_t iarray_expr_bind(iarray_expression_t *e, const char *var, iarray_container_t *val)
ina_rc_t iarray_expr_compile(iarray_expression_t *e, const char *expr)
ina_rc_t iarray_eval(iarray_expression_t *e, iarray_container_t *ret)
# Linear algebra
ctypedef enum iarray_operator_hint_t:
IARRAY_OPERATOR_GENERAL = 0
IARRAY_OPERATOR_SYMMETRIC
IARRAY_OPERATOR_TRIANGULAR
ina_rc_t iarray_linalg_matmul(iarray_context_t *ctx,
iarray_container_t *a,
iarray_container_t *b,
iarray_container_t *result,
int64_t *bshape_a,
int64_t *bshape_b,
iarray_operator_hint_t hint)
# Iterators
ctypedef struct iarray_iter_write_block_t
ctypedef struct iarray_iter_write_block_value_t:
void *block_pointer
int64_t *block_index
int64_t *elem_index
int64_t nblock
int64_t *block_shape
int64_t block_size
ina_rc_t iarray_iter_write_block_new(iarray_context_t *ctx,
iarray_iter_write_block_t **itr,
iarray_container_t *container,
const int64_t *blockshape,
iarray_iter_write_block_value_t *value,
bool external_buffer)
void iarray_iter_write_block_free(iarray_iter_write_block_t **itr)
ina_rc_t iarray_iter_write_block_next(iarray_iter_write_block_t *itr, void *buffer, int32_t bufsize)
ina_rc_t iarray_iter_write_block_has_next(iarray_iter_write_block_t *itr)
ctypedef struct iarray_iter_read_block_t
ctypedef struct iarray_iter_read_block_value_t:
void *block_pointer
int64_t *block_index
int64_t *elem_index
int64_t nblock
int64_t* block_shape
int64_t block_size
ina_rc_t iarray_iter_read_block_new(iarray_context_t *ctx,
iarray_iter_read_block_t **itr,
iarray_container_t *cont,
const int64_t *blockshape,
iarray_iter_read_block_value_t *value,
bool external_buffer)
void iarray_iter_read_block_free(iarray_iter_read_block_t **itr)
ina_rc_t iarray_iter_read_block_next(iarray_iter_read_block_t *itr, void *buffer, int32_t bufsize)
ina_rc_t iarray_iter_read_block_has_next(iarray_iter_read_block_t *itr)
# Random
ctypedef enum iarray_random_rng_t:
IARRAY_RANDOM_RNG_MERSENNE_TWISTER
IARRAY_RANDOM_RNG_SOBOL
ctypedef enum iarray_random_dist_parameter_t:
IARRAY_RANDOM_DIST_PARAM_MU
IARRAY_RANDOM_DIST_PARAM_SIGMA
IARRAY_RANDOM_DIST_PARAM_ALPHA
IARRAY_RANDOM_DIST_PARAM_BETA
IARRAY_RANDOM_DIST_PARAM_LAMBDA
IARRAY_RANDOM_DIST_PARAM_A
IARRAY_RANDOM_DIST_PARAM_B
IARRAY_RANDOM_DIST_PARAM_P
IARRAY_RANDOM_DIST_PARAM_M
IARRAY_RANDOM_DIST_PARAM_SENTINEL
ctypedef struct iarray_random_ctx_t
ina_rc_t iarray_random_ctx_new(iarray_context_t *ctx,
uint32_t seed,
iarray_random_rng_t rng,
iarray_random_ctx_t **rng_ctx)
void iarray_random_ctx_free(iarray_context_t *ctx, iarray_random_ctx_t **rng_ctx)
ina_rc_t iarray_random_dist_set_param_float(iarray_random_ctx_t *ctx,
iarray_random_dist_parameter_t key,
float value)
ina_rc_t iarray_random_dist_set_param_double(iarray_random_ctx_t *ctx,
iarray_random_dist_parameter_t key,
double value)
ina_rc_t iarray_random_rand(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_random_ctx_t *rand_ctx,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_random_randn(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_random_ctx_t *rand_ctx,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_random_beta(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_random_ctx_t *rand_ctx,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_random_lognormal(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_random_ctx_t *rand_ctx,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_random_exponential(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_random_ctx_t *random_ctx,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_random_uniform(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_random_ctx_t *random_ctx,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_random_normal(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_random_ctx_t *random_ctx,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_random_bernoulli(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_random_ctx_t *random_ctx,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_random_binomial(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_random_ctx_t *random_ctx,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_random_poisson(iarray_context_t *ctx,
iarray_dtshape_t *dtshape,
iarray_random_ctx_t *random_ctx,
iarray_store_properties_t *store,
int flags,
iarray_container_t **container)
ina_rc_t iarray_random_kstest(iarray_context_t *ctx,
iarray_container_t *c1,
iarray_container_t *c2,
bool *res)