Addition of BUCTD Models - #2952

Merged

MMathisLab merged 114 commits into

mainfrom

Apr 14, 2025

Commits on Mar 21, 2024

add code of hrnet + coam backbone
LucZot
committed
b57d849
refactor and finish hrnet+coam integration
LucZot
committed
0690899
add ctd configs
LucZot
committed
c6e6668
initial work on generative sampling

n-poulsen
authored and
LucZot
committed
78ebb57
buctd cont I
LucZot
committed
4503b87
prepare dataloader for loading cond pose with gen sampling
LucZot
committed
ec4aa87
adapt hrnet-coam output to hrnet code
LucZot
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6c0cf37
put kpt encoders into modules
LucZot
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704a0c6
add kpt encoder to hrnet_coam
LucZot
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a53ba27

Commits on Mar 22, 2024

small additions
LucZot
committed
964dd5c
init CTD inference
LucZot
committed
3e85fd1
test CTD training - I
LucZot
committed
8c94c7b

Commits on Mar 26, 2024

buctd training!
LucZot
committed
107ea70

Commits on Mar 27, 2024

remove one for loop in _get_condition_matrix
LucZot
committed
f8b7fa9

Commits on Mar 28, 2024

optim trials for cond kpt encoding
LucZot
committed
9bb4ae6

Commits on Apr 7, 2024

add ctd evaluation based on loaded bu predictions
LucZot
committed
ac29688

Commits on Apr 8, 2024

use only overlapping individuals for swapping error
LucZot
committed
bb31cc1

Commits on Apr 22, 2024

add marmoset bu path
LucZot
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ee7918f
Merge branch 'main' into lucas/buctd_integration
LucZot
committed
b83e8ec
scale cond_kpts in collate
LucZot
committed
e769277

Commits on Apr 24, 2024

switch back to original function for creating conditional matrix
LucZot
committed
006b13a

Commits on May 22, 2024

Commits on May 23, 2024

make CTD test inference compatible with previous code
LucZot
committed
c93c1bd
add bu name to output path names for CTD test inference
LucZot
committed
9c9ef50
add bu name to output path names for CTD test inference - fix
LucZot
committed
4de92f9

Commits on May 30, 2024

update BUCTD training with new TD developments
LucZot
committed
fbbaf13

Commits on Jun 24, 2024

merged main
n-poulsen
committed
5a432b5

Commits on Dec 9, 2024

Merge branch 'pytorch_dlc' into lucas/buctd_integration
n-poulsen
committed
783cf79
finish merge w main -> works as before

LucZot
authored and
n-poulsen
committed
8f3b82d
get_pose_inference_runner for CTD
n-poulsen
committed
e930274

Commits on Jan 15, 2025

lastest buctd devs
LucZot
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0773924
Merge branch 'pytorch_dlc' into lucas/buctd_v2
n-poulsen
committed
0609cc4
import fix
n-poulsen
committed
e432b9f
func name fix
n-poulsen
committed
699a25f
bug fix: pose postprocessor not built
n-poulsen
committed
c792c9c

Commits on Jan 17, 2025

bug fix: evaluate and inference
n-poulsen
committed
1b723c2
fix cropped_size variable and hacky test loading
LucZot
committed
7cd1203
Merge branch 'lucas/buctd_v2' of github.com:AlexEMG/DLCdev into lucas/buctd_v2
LucZot
committed
8153c08

Commits on Feb 6, 2025

Fixes to evaluation/inference on empty conditions
n-poulsen
committed
c012941
added expected format
n-poulsen
committed
0be7e2e
Merge branch 'pytorch_dlc' into lucas/buctd_v2
n-poulsen
committed
dd52784

Commits on Feb 7, 2025

black for CoAM module
n-poulsen
committed
46c213c

Commits on Mar 18, 2025

add conditional prenet draft
LucZot
committed
a521ff3

Commits on Mar 19, 2025

add config files for hrnet+prenet
LucZot
committed
b0dcefd
add draft stacked keypoint enc
LucZot
committed
86724c4
updated code for CrowdPose/COCO OKS sigma
n-poulsen
committed
c58ddbe

Commits on Mar 20, 2025

fix prenet details
LucZot
committed
14b3eae
unfreeze bn stats of prenet+hrnet
LucZot
committed
a1aff5c

Commits on Mar 24, 2025

fix stacked keypoint encoding
LucZot
committed
77ee4cf

Commits on Mar 25, 2025

Merge branch 'public' into lucas/buctd_v2
n-poulsen
committed
c5d271a

Commits on Mar 26, 2025

improved loading conditions from files
n-poulsen
committed
d4ed35c
removed debug prints
n-poulsen
committed
dc7f1f0
removed some debug comments
n-poulsen
committed
2c9a1b9
small clean up ctd configs
LucZot
committed
e095950
improved loading conditions
n-poulsen
committed
b6d99fe

Commits on Mar 27, 2025

add config for rtmpose+prenet
LucZot
committed
4460b63
add img_size to hrnet_coam config
LucZot
committed
a26d015
First implementation CTDInferenceRunner
n-poulsen
committed
369048d
Merge branch 'public' into lucas/buctd_v2
n-poulsen
committed
583cfb2
clean cond enc; extend ctd configs; add ctd related funcs to data loading
LucZot
committed
a9ea341
Merge branch 'lucas/buctd_v2' of github.com:AlexEMG/DLCdev into lucas/buctd_v2
LucZot
committed
6045f1a
add config for humans and fix rtmpose ctd config
LucZot
committed
cf424ba
fix config human
LucZot
committed
3fa99cb
small fixes
LucZot
committed
e568ca5

Commits on Mar 28, 2025

improved CTD model config code
n-poulsen
committed
7b100ce
implement re-scoring for CTD
n-poulsen
committed
4ef5b47
add TD aug for CTD models
n-poulsen
committed
d34aece
fix evaluation and debug print
n-poulsen
committed
e80bb5b
fixes to video inference
n-poulsen
committed
19a3258
add gen sampling params for crowdpose
LucZot
committed
5ebcbdc
Merge branch 'lucas/buctd_v2' of github.com:AlexEMG/DLCdev into lucas/buctd_v2
LucZot
committed
4815020
small fix config human ctd
LucZot
committed
86b6704
bug fix: dataset idv IDs
n-poulsen
committed
6f55b9f
Merge branch 'lucas/buctd_v2' of github.com:AlexEMG/DLCdev into lucas/buctd_v2
LucZot
committed
38b1a26
bug fix: dataset idv IDs
n-poulsen
committed
5a3f227
Merge branch 'lucas/buctd_v2' of github.com:AlexEMG/DLCdev into lucas/buctd_v2
LucZot
committed
2b1205f
fix bug when no keypoints are visible
n-poulsen
committed
edbc25a
Merge branch 'lucas/buctd_v2' of github.com:AlexEMG/DLCdev into lucas/buctd_v2
LucZot
committed
eee62d7
fix dataloader: trim area and bboxes
n-poulsen
committed
ab75ce9
Merge branch 'lucas/buctd_v2' of github.com:AlexEMG/DLCdev into lucas/buctd_v2
LucZot
committed
0120285
implemented CTD inference
n-poulsen
committed
29d9663
add coam config for crowdpose
LucZot
committed
9e157bf
Merge branch 'lucas/buctd_v2' of github.com:AlexEMG/DLCdev into lucas/buctd_v2
LucZot
committed
24c6db5

Commits on Apr 1, 2025

Commits on Apr 9, 2025

implement user-friendly CTD inference (#268)
n-poulsen
authored
2453441

Commits on Apr 10, 2025

bug fixes and improvements to default configs
n-poulsen
committed
cb65d69
update LR for CTD models
n-poulsen
committed
63c6ce2
rename Task.CTD to Task.COND_TOP_DOWN (#270)
n-poulsen
authored
8cbf38a
remove unused code
n-poulsen
committed
e5d2d28
remove unused code
n-poulsen
committed
12cf3fa

Commits on Apr 11, 2025

add link to COLAB in maDLC_UserGuide
n-poulsen
committed
8140467
Merge branch 'main' into lucas/buctd_v2
n-poulsen
committed
2a43052
update BUCTD colab
n-poulsen
committed
f54cc47
fix COLAB rendering
n-poulsen
committed
4ff3d95
fix COLAB rendering
n-poulsen
committed
bd2d14d
fix COLAB rendering
n-poulsen
committed
28ff47f
fix pip install in COLAB
n-poulsen
committed
a04a9bd
skip notebooks for codespell
n-poulsen
committed
c42fe22
install deeplabcut with --pre in colab
n-poulsen
committed
1d92522
fix tests
n-poulsen
committed
b0dae22
Merge branch 'main' into lucas/buctd_v2
MMathisLab
authored
9696a4b
fix failing tests on windows
n-poulsen
committed
9eec042
fix tests windows
n-poulsen
committed
a42c61d

Commits on Apr 14, 2025

Update architectures.md
AlexEMG
authored
1d67089
deal with absolute windows paths
n-poulsen
committed
d6b3f74
Version update
AlexEMG
committed
0fc92a0
fix when paths are converted to windows
n-poulsen
committed
6a1e0a9
Merge branch 'main' into lucas/buctd_v2
n-poulsen
committed
3900605
fix windows tests
n-poulsen
committed
fb7c647
Merge branch 'main' into lucas/buctd_v2
MMathisLab
authored
44a54fb