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    13 repositories

    • seqware-bag

      Public
      Ansible playbooks for deploying SeqWare with metadata for Bindle
      Shell
      •
      GNU General Public License v3.0
      •1•0•1•1•Updated Dec 15, 2023Dec 15, 2023

    • seqware.github.com

      Public
      SeqWare home pages
      HTML
      •1•1•0•0•Updated Nov 23, 2022Nov 23, 2022

    • seqware

      Public
      This is the SeqWare Project's main repo.
      javabioinformaticsngs
      javabioinformaticsngs
      Java
      •
      GNU General Public License v3.0
      •17•30•5•0•Updated Jul 9, 2018Jul 9, 2018

    • seqware_whitestar

      Public
      This is the container that houses SeqWare WhiteStar with a minimal set of dependencies
      Apache License 2.0
      •1•2•0•0•Updated Apr 11, 2018Apr 11, 2018

    • seqware-sandbox

      Public
      A location where we can explore new SeqWare sub-projects, tools, and prototypes before they are ready for the main repo.
      Java
      •
      GNU General Public License v3.0
      •2•2•0•0•Updated Aug 14, 2016Aug 14, 2016

    • seqware_test_environment

      Public
      Sets up a test environment for SeqWare continuous integration testing on Travis-CI
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 10, 2016Aug 10, 2016

    • oozie-sge

      Public
      This is a repository for the SeqWare Oozie-SGE plugin. It lives outside of the main SeqWare repository because it's really an extension of Oozie to support SGE…
      Java
      •0•1•0•0•Updated Jun 22, 2016Jun 22, 2016

    • documentation_builder

      Public
      This container builds our documentation using nanoc
      0•0•0•0•Updated May 12, 2016May 12, 2016

    • unstable.seqware.io

      Public
      Repository for hosting our 1.1 docs in progress
      HTML
      •0•0•0•0•Updated May 6, 2016May 6, 2016

    • seqware_full

      Public
      This is the container that houses SeqWare with a full set of dependencies including SGE, Hadoop, and Oozie
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated Nov 30, 2015Nov 30, 2015

    • public-workflows

      Public
      A place to collaborate on public SeqWare workflows
      Perl
      •3•2•1•1•Updated Jul 21, 2015Jul 21, 2015

    • portal

      Public
      Provided as-is, this is the unsupported SeqWare Portal as of the 1.1.0-beta
      0•0•0•0•Updated Jan 7, 2015Jan 7, 2015

    • queryengine

      Public
      A HBase backed variant database for performing queries on VCF-style data
      Java
      •
      GNU General Public License v3.0
      •1•4•0•0•Updated Apr 2, 2014Apr 2, 2014
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